STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AFK1Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
A0A0D3B2J2
Uncharacterized protein.
  
  
 0.546
A0A0D3AGQ1
Uncharacterized protein.
  
    0.543
A0A0D3CGS0
Uncharacterized protein.
  
  
  0.543
A0A0D3DNY5
Uncharacterized protein.
  
     0.541
A0A0D3AUY2
YDG domain-containing protein.
  
     0.540
A0A0D3B7V3
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
  
     0.540
A0A0D3C943
Uncharacterized protein.
  
     0.540
A0A0D3CXS6
Uncharacterized protein.
  
     0.540
A0A0D3EGR2
AAI domain-containing protein.
  
     0.540
A0A0D3AKV6
Uncharacterized protein.
  
     0.539
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.