STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AHE1Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
A0A0D3E1Q7
Uncharacterized protein.
      
 0.576
A0A0D3ARZ8
Uncharacterized protein.
      
 0.564
A0A0D3DND7
Uncharacterized protein.
      
 0.564
A0A0D3C4J6
Uncharacterized protein.
      
 0.545
A0A0D3BDJ8
CYTH domain-containing protein.
      
 0.541
A0A0D3CKN9
KH domain-containing protein.
      
 0.528
A0A0D3CSG0
KH domain-containing protein.
      
 0.528
A0A0D3C8B6
DUF4378 domain-containing protein.
      
 0.521
A0A0D3ADB3
Uncharacterized protein.
      
 0.518
A0A0D3BBI8
Uncharacterized protein.
      
 0.518
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.