STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AK21RRM domain-containing protein. (323 aa)    
Predicted Functional Partners:
A0A0D3BF63
RRM domain-containing protein.
  
 
 0.733
A0A0D3D8V5
Nuclear cap-binding protein subunit 2.
    
 0.551
A0A0D3B3B9
Uncharacterized protein.
  
 
 0.541
A0A0D3DME7
Uncharacterized protein.
  
 
 0.537
A0A0D3C3X3
Uncharacterized protein.
  
 
 0.535
A0A0D3B4Q2
Uncharacterized protein.
  
 
 0.534
A0A0D3CWW1
RRM domain-containing protein.
  
     0.533
A0A0D3AF34
Uncharacterized protein.
  
 
 0.531
A0A0D3AN03
RRM domain-containing protein.
  
 0.531
A0A0D3DGA2
Uncharacterized protein.
  
 
 0.530
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.