STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AK65Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family. (340 aa)    
Predicted Functional Partners:
A0A0D3EFL1
SWIB domain-containing protein.
    
 0.798
A0A0D3CJ92
Uncharacterized protein.
    
 0.707
A0A0D3CZ58
J domain-containing protein.
    
 0.707
A0A0D3A583
Uncharacterized protein.
    
 0.649
A0A0D3CB83
Uncharacterized protein; Belongs to the actin family.
    
 0.649
A0A0D3DLQ6
Uncharacterized protein.
    
 0.649
A0A0D3CBX0
Uncharacterized protein.
    
 0.548
A0A0D3CH09
Uncharacterized protein.
    
 0.548
A0A0D3DRY7
Uncharacterized protein.
    
 0.548
A0A0D3CZT3
Plus3 domain-containing protein.
    
 0.543
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.