STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3ALF0SCP domain-containing protein; Belongs to the CRISP family. (207 aa)    
Predicted Functional Partners:
A0A0D3AZS3
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
   
  
 0.796
A0A0D3E3T1
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
   
    0.796
A0A0D3BNH0
Uncharacterized protein.
   
    0.781
A0A0D3AHW4
Uncharacterized protein.
   
    0.771
A0A0D3EHL4
Uncharacterized protein.
   
    0.771
A0A0D3C9R5
LRRNT_2 domain-containing protein.
   
    0.744
A0A0D3DXU6
Uncharacterized protein.
   
    0.744
A0A0D3BAB9
Uncharacterized protein.
   
    0.735
A0A0D3CLK0
Uncharacterized protein.
   
    0.735
A0A0D3ATY7
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
  
    0.703
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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