STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3ANC5Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
A0A0D3B8C0
DNA_mis_repair domain-containing protein.
      
 0.551
A0A0D2ZSI2
Uncharacterized protein.
  
     0.511
A0A0D3E9Q0
SufE domain-containing protein.
      
 0.509
A0A0D3BTG3
Uncharacterized protein.
  
     0.505
A0A0D3B8S4
Uncharacterized protein.
  
     0.501
A0A0D3E015
Uncharacterized protein.
  
     0.498
A0A0D3BIZ9
Uncharacterized protein.
  
     0.487
A0A0D3DK02
Uncharacterized protein.
  
     0.485
A0A0D3BA64
Uncharacterized protein.
  
     0.484
A0A0D3BNI6
Uncharacterized protein.
  
     0.484
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.