STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AP68Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
A0A0D3BH85
Uncharacterized protein.
      
 0.542
A0A0D3BR10
Uncharacterized protein.
      
 0.542
A0A0D3CD45
Auxin_canalis domain-containing protein.
  
     0.542
A0A0D3AKK9
DUF642 domain-containing protein.
  
     0.541
A0A0D3C1Y7
Uncharacterized protein.
      
 0.541
A0A0D3D6A1
Uncharacterized protein.
  
     0.541
A0A0D3CEA9
Uncharacterized protein.
  
     0.539
A0A0D3CWY7
Uncharacterized protein.
  
     0.513
A0A0D3BIV4
Uncharacterized protein.
  
     0.510
A0A0D3CW88
Uncharacterized protein.
  
     0.509
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.