STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AQA9Nascent polypeptide-associated complex subunit beta. (215 aa)    
Predicted Functional Partners:
A0A0D3DUK1
Uncharacterized protein.
   
 
 0.968
A0A0D3DBR5
Uncharacterized protein.
   
 
 0.943
A0A0D3AF95
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.911
A0A0D3BA14
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.911
A0A0D3BJ55
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
   0.906
A0A0D3A400
Uncharacterized protein.
   
   0.903
A0A0D3AUK4
Uncharacterized protein.
   
   0.903
A0A0D3D9H7
Uncharacterized protein.
   
   0.903
A0A0D3EFN8
NAC-A/B domain-containing protein.
   
 
 0.899
A0A0D3D8J5
Uncharacterized protein.
   
 
 0.890
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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