STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AQB3Uncharacterized protein. (211 aa)    
Predicted Functional Partners:
A0A0D3DXI6
Uncharacterized protein.
  
     0.521
A0A0D3E592
F-box domain-containing protein.
  
     0.520
A0A0D3BRM6
Ubiquitin-like domain-containing protein.
    
 0.517
A0A0D3C9T9
Uncharacterized protein.
  
     0.517
A0A0D3DPI8
Uncharacterized protein.
  
     0.516
A0A0D3DXI9
Uncharacterized protein.
  
     0.516
A0A0D3DPI7
Uncharacterized protein.
  
     0.512
A0A0D3DXI7
Uncharacterized protein.
  
     0.511
A0A0D3DFG7
Uncharacterized protein.
  
     0.510
A0A0D3DXI8
Uncharacterized protein.
  
     0.510
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.