STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AQV4Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
A0A0D3B855
B2-adapt-app_C domain-containing protein.
  
 
  0.577
A0A0D3AVH1
Epimerase domain-containing protein.
    
 
 0.539
A0A0D3ECE9
Epimerase domain-containing protein.
    
 
 0.539
A0A0D3CJR9
Uncharacterized protein.
  
     0.534
A0A0D3BBJ4
Uncharacterized protein.
  
     0.533
A0A0D3BBS7
Uncharacterized protein.
  
 
   0.531
A0A0D3E5I9
Uncharacterized protein.
  
     0.521
A0A0D3D4J1
X8 domain-containing protein.
  
     0.514
A0A0D3BI10
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
  
     0.513
A0A0D3D4K0
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
  
     0.510
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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