Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A0D3AR67Protein kinase domain-containing protein. (702 aa)    
Predicted Functional Partners:
A0A0D3D845
N-acetyltransferase domain-containing protein.
      
 0.682
A0A0D3DI28
HTH myb-type domain-containing protein.
      
 0.634
A0A0D3DZR3
BZIP domain-containing protein.
      
 0.575
A0A0D3DG83
Uncharacterized protein.
      
 0.574
A0A0D3AMI4
Uncharacterized protein.
      
 0.509
A0A0D3B3Q4
Uncharacterized protein.
      
 0.509
A0A0D3DNH5
Protein kinase domain-containing protein.
  
  0.497
A0A0D3A2W9
Uncharacterized protein.
      
 0.489
A0A0D3BM10
Uncharacterized protein.
      
 0.489
A0A0D3DH57
Uncharacterized protein.
      
 0.489
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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