STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AV53Sulfhydryl oxidase. (507 aa)    
Predicted Functional Partners:
A0A0D3BR99
Uncharacterized protein.
      
 0.559
A0A0D3AF09
Thioredoxin domain-containing protein.
     
 0.550
A0A0D3DVK6
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.530
A0A0D2ZQS4
Uncharacterized protein.
      
 0.524
A0A0D2ZQS8
Uncharacterized protein.
      
 0.524
A0A0D3DEE5
Uncharacterized protein.
      
 0.524
A0A0D3A217
Phosducin domain-containing protein.
     
 0.518
A0A0D3DHN2
Uncharacterized protein.
     
 0.518
A0A0D3BTT9
zf-Tim10_DDP domain-containing protein.
      
 0.517
A0A0D3A1P9
VKc domain-containing protein.
      
 0.446
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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