STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AVA6Two-component response regulator; Transcriptional activator that binds specific DNA sequence. (437 aa)    
Predicted Functional Partners:
A0A0D3BZT3
HPt domain-containing protein.
    
 0.851
A0A0D3C7B7
HPt domain-containing protein.
    
 0.835
A0A0D3CVK1
HPt domain-containing protein.
    
 0.815
A0A0D3CJM6
HPt domain-containing protein.
    
 0.802
A0A0D3DBJ1
HPt domain-containing protein.
    
 0.761
A0A0D3E0N1
HPt domain-containing protein.
    
 0.761
A0A0D3ABS9
HPt domain-containing protein.
    
 0.731
A0A0D3BBM6
HPt domain-containing protein.
    
 0.701
A0A0D3EHK3
Arginyl-tRNA--protein transferase; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.600
A0A0D3B636
Response regulatory domain-containing protein.
      
 0.556
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.