STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AX02Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (529 aa)    
Predicted Functional Partners:
A0A0D3DZD8
Histone domain-containing protein.
   
 0.626
A0A0D3CCE3
Uncharacterized protein.
   
 0.597
A0A0D3D1I8
Uncharacterized protein.
   
 0.597
A0A0D3D7F0
Uncharacterized protein.
   
 0.597
A0A0D3BF22
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.579
A0A0D3EGP2
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.579
A0A0D3DDR5
Uncharacterized protein.
   
 0.571
A0A0D3A131
Histone H3; Belongs to the histone H3 family.
   
 0.557
A0A0D3AQT1
Histone domain-containing protein.
   
 0.557
A0A0D3D3Q6
Histone domain-containing protein.
   
 0.557
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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