Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AX44Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
A0A0D3CD63
Uncharacterized protein.
    
  0.783
A0A0D3B7G2
SPX domain-containing protein.
    
 0.718
A0A0D3C3Z9
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.710
A0A0D3A110
Inos-1-P_synth domain-containing protein.
      
 0.681
A0A0D3AK38
SPX domain-containing protein.
    
 0.655
A0A0D3B221
SPX domain-containing protein.
    
 0.655
A0A0D3DJR3
Uncharacterized protein.
    
 
 0.646
A0A0D3AB79
Uncharacterized protein.
    
 0.630
A0A0D3D5H1
Uncharacterized protein.
    
 0.630
A0A0D3E650
Uncharacterized protein.
      
 0.616
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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