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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AX48Protein kinase domain-containing protein. (854 aa)    
Predicted Functional Partners:
A0A0D3DG95
Uncharacterized protein.
      
 0.517
A0A0D3BBN4
Uncharacterized protein.
    
 
 0.512
A0A0D3CJJ2
Uncharacterized protein.
    
 
 0.512
A0A0D3D3B0
LRRNT_2 domain-containing protein.
    
 0.504
A0A0D3E370
Uncharacterized protein.
    
 0.504
A0A0D2ZQ06
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
    
 0.501
A0A0D3C6N4
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
   
 0.478
A0A0D3C781
Uncharacterized protein.
      
 0.474
A0A0D3DIL2
Uncharacterized protein.
      
 0.474
A0A0D3C660
Uncharacterized protein.
    
 0.473
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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