Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AYC5Uncharacterized protein. (530 aa)    
Predicted Functional Partners:
A0A0D3D515
HTH cro/C1-type domain-containing protein.
      
 0.725
A0A0D3DD43
Uncharacterized protein.
   
  
 0.700
A0A0D3DKD7
BZIP domain-containing protein.
      
 0.687
A0A0D2ZR64
GRAS domain-containing protein; Belongs to the GRAS family.
      
 0.639
A0A0D3E3T9
GRAS domain-containing protein; Belongs to the GRAS family.
      
 0.639
A0A0D3AP89
AB hydrolase-1 domain-containing protein.
   
  
 0.584
A0A0D3E0W9
Uncharacterized protein.
   
  
 0.557
A0A0D3DW22
Uncharacterized protein.
   
  
 0.556
A0A0D3DAN9
Usp domain-containing protein.
   
  
 0.552
A0A0D3E7S7
Usp domain-containing protein.
   
  
 0.552
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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