STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B0H6Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
A0A0D3D8J5
Uncharacterized protein.
   
 0.972
A0A0D3BIB8
Nup54 domain-containing protein.
   
 0.971
A0A0D3E4A4
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.968
A0A0D3EHK6
Uncharacterized protein.
    
 0.936
A0A0D3C5N6
Nuclear pore protein.
   
 0.925
A0A0D3DTX1
Nuclear pore protein.
   
 0.925
A0A0D3CAA2
Uncharacterized protein.
   
 0.921
A0A0D3DX98
Uncharacterized protein.
   
 0.921
A0A0D3E443
Uncharacterized protein.
   
 0.912
A0A0D3CJN3
RRM Nup35-type domain-containing protein; Belongs to the Casparian strip membrane proteins (CASP) family.
    
 0.901
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.