STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B3A7Deacetylase sirtuin-type domain-containing protein. (468 aa)    
Predicted Functional Partners:
A0A0D3AI94
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
  
  
0.963
A0A0D3BN33
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.963
A0A0D3CQX4
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
 0.963
A0A0D3B3A6
Nicotinamide-nucleotide adenylyltransferase.
   
 0.956
A0A0D3EBH4
Nicotinamide-nucleotide adenylyltransferase.
   
 0.956
A0A0D3ABX3
Uncharacterized protein.
  
 
 0.946
A0A0D3BCH7
Uncharacterized protein.
  
 
 0.946
A0A0D3CC57
Uncharacterized protein.
  
 
 0.946
A0A0D3CHU2
Uncharacterized protein.
  
 
 0.946
A0A0D3B577
IU_nuc_hydro domain-containing protein.
   
 
 0.915
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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