STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B5Y0Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
A0A0D3A1F9
LIM zinc-binding domain-containing protein.
      
 0.514
A0A0D3DZF9
Uncharacterized protein.
      
 0.514
A0A0D3AMM1
Uncharacterized protein.
   
  
 0.500
A0A0D3EAH7
Uncharacterized protein.
   
  
 0.500
A0A0D3AEC2
Uncharacterized protein.
      
 0.459
A0A0D3CKY5
Uncharacterized protein.
      
 0.459
A0A0D3CXW7
B box-type domain-containing protein.
      
 0.455
A0A0D3AFD1
Uncharacterized protein.
      
 0.442
A0A0D3B9X4
Uncharacterized protein.
      
 0.442
A0A0D3DS02
C2H2-type domain-containing protein.
     
 0.427
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.