STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B6B9Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (275 aa)    
Predicted Functional Partners:
A0A0D3D6L7
Purple acid phosphatase.
    
 0.968
A0A0D3DA94
Purple acid phosphatase.
    
 0.968
A0A0D3DPQ6
Purple acid phosphatase.
    
 0.968
A0A0D3A4V0
MSP domain-containing protein.
  
 
 0.959
A0A0D3ACR6
Purple acid phosphatase.
    
 0.957
A0A0D3CJ67
Purple acid phosphatase.
    
 0.957
A0A0D3E9E7
Nudix hydrolase domain-containing protein.
    
 0.953
A0A0D3B0A2
FAD_syn domain-containing protein.
    
 0.952
A0A0D3DA91
Uncharacterized protein.
    
 0.939
A0A0D3A3E9
Thioredoxin domain-containing protein.
    
 0.907
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.