STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B7G9Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
A0A0D3BIK1
Uncharacterized protein.
  
    0.534
A0A0D3CE65
Uncharacterized protein.
  
    0.519
A0A0D3DTR7
VQ domain-containing protein.
  
    0.510
A0A0D3D7K3
Uncharacterized protein.
  
    0.505
A0A0D3AG66
Uncharacterized protein.
  
     0.502
A0A0D2ZWW2
Uncharacterized protein.
  
    0.495
A0A0D3D4U7
Uncharacterized protein.
  
     0.495
A0A0D3D7M2
Uncharacterized protein.
  
     0.494
A0A0D3DQP5
Uncharacterized protein.
  
    0.493
A0A0D3C847
Uncharacterized protein.
  
     0.491
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.