STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B864Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
A0A0D3BVD8
Apple domain-containing protein.
  
     0.542
A0A0D3BXZ0
Uncharacterized protein.
  
     0.538
A0A0D3B2X5
Uncharacterized protein.
  
     0.535
A0A0D3ALC4
Uncharacterized protein.
  
     0.533
A0A0D3A7A0
Uncharacterized protein.
  
     0.532
A0A0D3DN94
Uncharacterized protein.
  
     0.532
A0A0D3CJT2
Uncharacterized protein.
  
     0.531
A0A0D3EC89
Uncharacterized protein.
  
     0.531
A0A0D2ZUM5
Uncharacterized protein.
  
     0.525
A0A0D3A6Z7
HMA domain-containing protein.
  
     0.525
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.