STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3B8Z0Protein translocase subunit SecA; Belongs to the SecA family. (979 aa)    
Predicted Functional Partners:
A0A0D3DQT4
Protein translocase subunit SecA; Belongs to the SecA family.
  
  
 
0.906
A0A0D3BDI8
TPR_REGION domain-containing protein.
    
 0.897
A0A0D3CH49
Uncharacterized protein.
   
 0.878
A0A0D3EIB3
Uncharacterized protein.
    
 0.845
A0A0D3D2W8
Uncharacterized protein.
  
   
 0.660
A0A0D3AAJ4
Plus3 domain-containing protein.
    
 0.617
A0A0D3BVB3
Plus3 domain-containing protein.
    
 0.617
A0A0D3CF46
Formyl_trans_N domain-containing protein.
      
 0.574
A0A0D3CF47
Formyl_trans_N domain-containing protein.
      
 0.574
A0A0D3AER6
ArsA_ATPase domain-containing protein.
      
 0.569
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.