STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BG46Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
A0A0D3A0I4
Uncharacterized protein.
  
     0.540
A0A0D3DN55
Uncharacterized protein.
  
     0.530
A0A0D3AJ64
Uncharacterized protein.
  
     0.525
A0A0D3CLI6
Uncharacterized protein.
  
     0.524
A0A0D3B185
Uncharacterized protein.
  
     0.523
A0A0D3AET0
Uncharacterized protein.
  
     0.519
A0A0D3A1H4
Uncharacterized protein.
  
     0.509
A0A0D3CAL3
Uncharacterized protein.
  
 
   0.509
A0A0D3E8A3
Uncharacterized protein.
  
     0.509
A0A0D3AFY4
Uncharacterized protein.
  
     0.505
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.