STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BH74Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
A0A0D3BII0
CUE domain-containing protein.
    
 0.967
A0A0D3CE38
Uncharacterized protein.
    
 0.967
A0A0D3BHV4
zf-C2HC5 domain-containing protein.
    
 
 0.946
A0A0D3AEG7
Small nuclear ribonucleoprotein G.
   
  0.859
A0A0D2ZSE9
Uncharacterized protein.
   
 0.805
A0A0D3BLM2
Uncharacterized protein.
   
 0.805
A0A0D3E0A4
TPR_REGION domain-containing protein.
   
 0.805
A0A0D3A4I5
MPN domain-containing protein.
   
 0.775
A0A0D3AH89
PRO8NT domain-containing protein.
   
 0.775
A0A0D3BQR0
PRP8_domainIV domain-containing protein.
   
 0.775
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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