STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BJF0NmrA domain-containing protein. (308 aa)    
Predicted Functional Partners:
A0A0D3C9C0
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
      
 0.547
A0A0D3ED73
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
      
 0.547
A0A0D3B6U6
NAD(P)-bd_dom domain-containing protein.
      
 0.530
A0A0D3B8W4
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     
 0.517
A0A0D3DZZ2
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     
 0.517
A0A0D3CV21
Uncharacterized protein.
   
 
 0.492
A0A0D3DUQ7
Uncharacterized protein.
   
 
 0.492
A0A0D3AIA6
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
 
 0.489
A0A0D3D9C0
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
      
 0.489
A0A0D3DU80
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
      
 0.489
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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