Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BME3LRRNT_2 domain-containing protein. (744 aa)    
Predicted Functional Partners:
A0A0D3ATH1
Uncharacterized protein.
    
 0.624
A0A0D2ZRI5
Uncharacterized protein.
    
  0.597
A0A0D3D2L2
Uncharacterized protein.
    
  0.597
A0A0D3CQF6
Uncharacterized protein.
  
 
 0.582
A0A0D3B3F4
SUI1 domain-containing protein.
      
 0.557
A0A0D3BN31
SUI1 domain-containing protein.
      
 0.557
A0A0D3CSC1
SUI1 domain-containing protein.
      
 0.557
A0A0D3EB68
SUI1 domain-containing protein.
      
 0.557
A0A0D3DMQ0
Uncharacterized protein.
  
 
  0.535
A0A0D3B8P7
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
     
 0.532
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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