Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BML9Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
A0A0D3CZM1
F-box domain-containing protein.
    
 0.757
A0A0D3AS37
Malectin_like domain-containing protein.
      
 0.738
A0A0D3A702
Uncharacterized protein.
      
 0.737
A0A0D3BZ49
Uncharacterized protein.
      
 0.737
A0A0D3CR08
Uncharacterized protein.
      
 0.737
A0A0D3E0G2
Uncharacterized protein.
      
 0.737
A0A0D2ZW89
Uncharacterized protein.
      
 0.707
A0A0D3B0N6
Uncharacterized protein.
      
 0.705
A0A0D3C4W5
Uncharacterized protein.
      
 0.705
A0A0D3A3Y3
TPR_REGION domain-containing protein.
      
 0.680
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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