Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BMP6Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
A0A0D3AR98
Uncharacterized protein.
     
 0.576
A0A0D3DB43
Uncharacterized protein.
      
 0.572
A0A0D3AJ71
U-box domain-containing protein.
     
 0.568
A0A0D3EFB4
U-box domain-containing protein.
     
 0.568
A0A0D3BE79
Uncharacterized protein.
     
 0.547
A0A0D3D3J6
Uncharacterized protein.
     
 0.547
A0A0D3DA47
Uncharacterized protein.
  
     0.542
A0A0D3E7F6
Uncharacterized protein.
  
     0.542
A0A0D3A3M3
Uncharacterized protein.
  
    0.540
A0A0D3B657
Uncharacterized protein.
  
     0.540
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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