STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BNK4Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
A0A0D3A542
Uncharacterized protein.
  
    0.535
A0A0D3B2P4
Uncharacterized protein.
  
     0.534
A0A0D3EI09
Uncharacterized protein.
  
     0.533
A0A0D3EAF0
Uncharacterized protein.
  
     0.532
A0A0D3C8S2
Uncharacterized protein.
  
     0.529
A0A0D3DDY3
Uncharacterized protein.
  
     0.528
A0A0D3A5Z5
Uncharacterized protein.
  
     0.526
A0A0D3A1Q4
Uncharacterized protein.
  
     0.525
A0A0D3EAF1
Uncharacterized protein.
  
     0.522
A0A0D3CKU6
Uncharacterized protein.
  
     0.520
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.