STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BPF1Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
A0A0D3DJ45
Tr-type G domain-containing protein.
  
 0.899
A0A0D3DYS2
Tr-type G domain-containing protein.
  
 0.899
A0A0D3BSG3
Uncharacterized protein.
    
   0.877
A0A0D3C3W4
Uncharacterized protein.
    
   0.877
A0A0D3C7J5
Uncharacterized protein.
    
   0.877
A0A0D3DIU5
WD_REPEATS_REGION domain-containing protein.
    
   0.877
A0A0D3A4M4
Small nuclear ribonucleoprotein-associated protein.
    
   0.862
A0A0D3BKM5
Small nuclear ribonucleoprotein-associated protein.
    
   0.862
A0A0D3DF66
Small nuclear ribonucleoprotein-associated protein.
    
   0.862
A0A0D2ZZ60
Uncharacterized protein.
    
 
 0.858
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.