STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BSB9C3H1-type domain-containing protein. (699 aa)    
Predicted Functional Partners:
A0A0D3EA00
FRIGIDA-like protein; Belongs to the Frigida family.
    
 0.596
A0A0D3D371
Uncharacterized protein.
    
 0.595
A0A0D3B5T4
Uncharacterized protein.
    
 0.562
A0A0D3CF88
FRIGIDA-like protein; Belongs to the Frigida family.
      
 0.556
A0A0D3BTL8
Uncharacterized protein.
    
 0.551
A0A0D3ATZ3
BED-type domain-containing protein.
    
 
 0.548
A0A0D3CF26
BED-type domain-containing protein.
    
 
 0.548
A0A0D3BFY5
Uncharacterized protein.
      
 0.545
A0A0D3CQ00
B30.2/SPRY domain-containing protein.
    
 0.527
A0A0D3A0G3
Uncharacterized protein.
      
 0.514
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.