STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BTR3F-box domain-containing protein. (383 aa)    
Predicted Functional Partners:
A0A0D3CGY9
F-box domain-containing protein.
  
   
 0.519
A0A0D3DHC0
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
  
  0.515
A0A0D3ABC8
F-box domain-containing protein.
  
   
 0.501
A0A0D3DJF9
Uncharacterized protein.
  
  
  0.488
A0A0D3AD11
F-box domain-containing protein.
  
     0.474
A0A0D3D3Y0
Phytocyanin domain-containing protein.
  
  
  0.472
A0A0D3DBP5
Uncharacterized protein.
  
     0.463
A0A0D3A1S0
Uncharacterized protein.
  
     0.462
A0A0D3BW70
Uncharacterized protein.
  
   
 0.457
A0A0D3C3M4
F-box domain-containing protein.
  
   
 0.455
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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