STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BVL2Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
A0A0D3CF49
BTP domain-containing protein.
  
   
 0.480
A0A0D3BS10
Uncharacterized protein.
  
     0.467
A0A0D3B4X4
Uncharacterized protein.
  
     0.454
A0A0D3BXF1
Uncharacterized protein.
    
   0.449
A0A0D3C847
Uncharacterized protein.
  
     0.449
A0A0D3CU71
Uncharacterized protein.
    
   0.449
A0A0D3CBY3
Uncharacterized protein.
  
     0.433
A0A0D3DQM0
Uncharacterized protein.
  
     0.431
A0A0D3B5V8
DUF4378 domain-containing protein.
  
     0.429
A0A0D3BNP2
BHLH domain-containing protein.
  
     0.422
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.