STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BYM3Uncharacterized protein. (772 aa)    
Predicted Functional Partners:
A0A0D3ATL0
DBD_Tnp_Mut domain-containing protein.
  
     0.518
A0A0D2ZTX9
DBD_Tnp_Mut domain-containing protein.
  
     0.510
A0A0D3E629
SWIM-type domain-containing protein.
  
     0.509
A0A0D3E8K1
MULE domain-containing protein.
  
     0.501
A0A0D3AH18
SWIM-type domain-containing protein.
  
     0.473
A0A0D3CR24
Uncharacterized protein.
  
     0.469
A0A0D3A0Q3
Uncharacterized protein.
  
     0.468
A0A0D2ZZ61
SWIM-type domain-containing protein.
  
     0.464
A0A0D3DLA5
SWIM-type domain-containing protein.
  
     0.461
A0A0D3E962
Uncharacterized protein.
  
     0.456
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.