STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3BZB6Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
A0A0D3DUD8
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.948
A0A0D3A5Y9
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.944
A0A0D3CQ81
TFIIA_gamma_C domain-containing protein.
    
  0.944
A0A0D3DFV4
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.944
A0A0D3DMQ8
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.944
A0A0D3AAT3
Uncharacterized protein.
    
 0.889
A0A0D3BZZ8
Uncharacterized protein.
    
  0.889
A0A0D3DP43
Uncharacterized protein.
    
 0.889
A0A0D3E0J0
Uncharacterized protein.
    
  0.889
A0A0D3BYL0
RNA_pol_L_2 domain-containing protein.
    
  0.875
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.