STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C098Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
A0A0D3BCG4
Uncharacterized protein.
      
 0.586
A0A0D3ADZ1
Uncharacterized protein.
   
  
 0.585
A0A0D3AIM9
Uncharacterized protein.
      
 0.577
A0A0D3E1H6
Uncharacterized protein.
   
  
 0.567
A0A0D3DU11
Uncharacterized protein.
      
 0.564
A0A0D3CAT2
Uncharacterized protein.
      
 0.559
A0A0D3CKG4
Uncharacterized protein.
      
 0.559
A0A0D3BEK1
Uncharacterized protein.
      
 0.558
A0A0D3AMI4
Uncharacterized protein.
   
  
 0.556
A0A0D3B3Q4
Uncharacterized protein.
   
  
 0.556
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.