STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C0W8Uncharacterized protein. (679 aa)    
Predicted Functional Partners:
A0A0D3DY90
Uncharacterized protein.
      
 0.566
A0A0D3AYP2
Uncharacterized protein.
      
 0.563
A0A0D3A732
Uncharacterized protein.
      
 0.562
A0A0D3DM78
Uncharacterized protein.
      
 0.562
A0A0D3AVA7
Uncharacterized protein.
      
 0.561
A0A0D3C7N7
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.559
A0A0D3D854
Uncharacterized protein.
      
 0.558
A0A0D3EFL6
ABC transporter domain-containing protein.
   
 
 0.558
A0A0D3AXD6
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.548
A0A0D3EA58
ZnF_CDGSH domain-containing protein.
    
 
 0.547
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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