STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C168WSD domain-containing protein. (482 aa)    
Predicted Functional Partners:
A0A0D3ASK7
Homeobox domain-containing protein.
  
   
 0.585
A0A0D3E071
Homeobox domain-containing protein.
  
   
 0.581
A0A0D3CZ42
KH_dom_type_1 domain-containing protein.
  
     0.533
A0A0D3BR48
Uncharacterized protein.
  
     0.531
A0A0D3AW50
Uncharacterized protein.
  
     0.528
A0A0D3DMP8
Uncharacterized protein.
  
     0.528
A0A0D3AFS6
Uncharacterized protein.
  
     0.526
A0A0D3DFZ7
Uncharacterized protein.
  
     0.526
A0A0D3AGW3
Uncharacterized protein.
  
     0.520
A0A0D2ZZP8
Uncharacterized protein.
  
     0.516
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.