STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C4Y7Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
A0A0D3C8Y3
Uncharacterized protein.
  
     0.511
A0A0D3DNT6
Uncharacterized protein.
  
     0.509
A0A0D3DP60
Uncharacterized protein.
  
     0.509
A0A0D3CRY5
Uncharacterized protein.
  
     0.498
A0A0D3BKD3
Uncharacterized protein.
  
     0.490
A0A0D3B9P3
Barwin domain-containing protein.
  
     0.485
A0A0D3E2Q8
Uncharacterized protein.
  
    0.482
A0A0D2ZVJ9
Uncharacterized protein.
  
     0.481
A0A0D3B9P2
Barwin domain-containing protein.
  
     0.478
A0A0D3BI85
Uncharacterized protein.
  
     0.474
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.