STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C6Q5Uncharacterized protein. (132 aa)    
Predicted Functional Partners:
A0A0D3D4D2
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.559
A0A0D3AMP2
Uncharacterized protein.
  
     0.537
A0A0D3DYN7
Uncharacterized protein.
  
     0.535
A0A0D2ZZR7
F-box domain-containing protein.
  
     0.531
A0A0D3BQB6
F-box domain-containing protein.
  
     0.531
A0A0D3BFL5
Uncharacterized protein.
  
     0.530
A0A0D3DTY6
F-box domain-containing protein.
  
     0.530
A0A0D3A0A8
WW domain-containing protein.
  
     0.529
A0A0D3BN85
F-box domain-containing protein.
  
     0.529
A0A0D3CLU1
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.529
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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