STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C7A8Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
A0A0D3DCS9
Uncharacterized protein.
  
  
 0.572
A0A0D3E1C6
Uncharacterized protein.
  
  
 0.554
A0A0D3CI13
Uncharacterized protein.
  
 
 0.551
A0A0D3BIW8
Uncharacterized protein.
  
 
  0.550
A0A0D3DF27
Uncharacterized protein.
  
 
  0.535
A0A0D3E4Y9
Uncharacterized protein.
  
  
  0.535
A0A0D3BN86
Uncharacterized protein.
  
     0.528
A0A0D3CZR7
Uncharacterized protein.
  
     0.528
A0A0D3DQR3
Uncharacterized protein.
  
 
  0.520
A0A0D3APT2
Uncharacterized protein.
  
     0.519
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.