STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3C7Q4Uncharacterized protein. (838 aa)    
Predicted Functional Partners:
A0A0D3APX2
Aminotran_1_2 domain-containing protein.
  
 
 0.937
A0A0D3CDI6
PRA-CH domain-containing protein.
  
 
 0.937
A0A0D3CGX0
PRA-CH domain-containing protein.
  
 
 0.937
A0A0D3CZZ5
Aminotran_1_2 domain-containing protein.
  
 
 0.937
A0A0D3B572
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
 
 0.936
A0A0D3BRM2
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
 
 0.936
A0A0D3A6S8
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
  
 
 0.932
A0A0D3BZU4
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
  
 
 0.932
A0A0D3AA04
Uncharacterized protein.
  
 
 0.914
A0A0D3ABJ8
Uncharacterized protein.
  
 
 0.914
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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