STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CAZ7Tr-type G domain-containing protein. (1022 aa)    
Predicted Functional Partners:
A0A0D3E4N6
RF_PROK_I domain-containing protein.
  
 0.958
A0A0D3CIR5
Uncharacterized protein.
   
 0.956
A0A0D3BS55
Uncharacterized protein.
  
 0.947
A0A0D3C450
Uncharacterized protein.
  
 0.947
A0A0D3AS28
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.943
A0A0D3CAV0
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 0.941
A0A0D3CAV8
Uncharacterized protein.
    
 0.904
A0A0D3DPX0
Uncharacterized protein.
    
 0.904
A0A0D3DCF0
Tim44 domain-containing protein.
    
 0.893
A0A0D3AYD6
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 0.891
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (24%) [HD]