STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CB45WD_REPEATS_REGION domain-containing protein. (328 aa)    
Predicted Functional Partners:
A0A0D3BRM6
Ubiquitin-like domain-containing protein.
   
 
 0.976
A0A0D3DBR5
Uncharacterized protein.
   
 
 0.973
A0A0D3BJ55
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.969
A0A0D3DUK1
Uncharacterized protein.
   
 
 0.967
A0A0D2ZSM3
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.932
A0A0D3D528
S4 RNA-binding domain-containing protein.
   
 
 0.932
A0A0D3DDR1
KOW domain-containing protein.
   
 
 0.929
A0A0D3DRR0
KOW domain-containing protein.
   
 
 0.929
A0A0D3AW77
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
  
 
 0.924
A0A0D3B1F4
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.920
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (18%) [HD]