A0A0D3CBR7 protein (Brassica oleracea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

A0A0D3CBR7

Uncharacterized protein. (490 aa)

Predicted Functional Partners:

A0A0D3AQX6

0.843

A0A0D3CWE2

0.843

A0A0D3D105

0.843

A0A0D3B9P7

0.634

A0A0D3B8H0

0.616

A0A0D3B8H1

0.616

A0A0D3D295

0.545

A0A0D3DWD4

0.545

A0A0D3E3N2

0.545

A0A0D3AUQ0

0.516

Your Current Organism:

Brassica oleracea

NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3AQX6	A0A0D3CBR7	Uncharacterized protein.	Uncharacterized protein.	0.843
A0A0D3AUQ0	A0A0D3B8H0	Uncharacterized protein.	SAM_MT_TRM5_TYW2 domain-containing protein.	0.601
A0A0D3AUQ0	A0A0D3B8H1	Uncharacterized protein.	TYW3 domain-containing protein.	0.601
A0A0D3AUQ0	A0A0D3B9P7	Uncharacterized protein.	TRUD domain-containing protein.	0.642
A0A0D3AUQ0	A0A0D3CBR7	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A0D3AUQ0	A0A0D3D295	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A0D3AUQ0	A0A0D3DWD4	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A0D3AUQ0	A0A0D3E3N2	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A0D3B8H0	A0A0D3AUQ0	SAM_MT_TRM5_TYW2 domain-containing protein.	Uncharacterized protein.	0.601
A0A0D3B8H0	A0A0D3B8H1	SAM_MT_TRM5_TYW2 domain-containing protein.	TYW3 domain-containing protein.	0.864
A0A0D3B8H0	A0A0D3B9P7	SAM_MT_TRM5_TYW2 domain-containing protein.	TRUD domain-containing protein.	0.786
A0A0D3B8H0	A0A0D3CBR7	SAM_MT_TRM5_TYW2 domain-containing protein.	Uncharacterized protein.	0.616
A0A0D3B8H1	A0A0D3AUQ0	TYW3 domain-containing protein.	Uncharacterized protein.	0.601
A0A0D3B8H1	A0A0D3B8H0	TYW3 domain-containing protein.	SAM_MT_TRM5_TYW2 domain-containing protein.	0.864
A0A0D3B8H1	A0A0D3B9P7	TYW3 domain-containing protein.	TRUD domain-containing protein.	0.786
A0A0D3B8H1	A0A0D3CBR7	TYW3 domain-containing protein.	Uncharacterized protein.	0.616
A0A0D3B9P7	A0A0D3AUQ0	TRUD domain-containing protein.	Uncharacterized protein.	0.642
A0A0D3B9P7	A0A0D3B8H0	TRUD domain-containing protein.	SAM_MT_TRM5_TYW2 domain-containing protein.	0.786
A0A0D3B9P7	A0A0D3B8H1	TRUD domain-containing protein.	TYW3 domain-containing protein.	0.786
A0A0D3B9P7	A0A0D3CBR7	TRUD domain-containing protein.	Uncharacterized protein.	0.634