STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CE37SPOC domain-containing protein. (1049 aa)    
Predicted Functional Partners:
A0A0D3C1J4
Uncharacterized protein.
  
 
  0.626
A0A0D3DBU9
Uncharacterized protein.
  
 
  0.545
A0A0D2ZZ49
TPR_REGION domain-containing protein.
  
 
  0.539
A0A0D3AWY6
Uncharacterized protein.
  
 
  0.532
A0A0D3EG74
Uncharacterized protein.
  
  0.529
A0A0D3DLQ2
Uncharacterized protein.
  
     0.517
A0A0D3CG15
Uncharacterized protein.
  
     0.516
A0A0D3B840
Uncharacterized protein.
  
 
  0.511
A0A0D3BAZ1
Uncharacterized protein.
  
     0.509
A0A0D3A2G6
Uncharacterized protein.
  
 
  0.506
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.