STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CEF5Dof-type domain-containing protein. (173 aa)    
Predicted Functional Partners:
A0A0D3BIM4
AP2/ERF domain-containing protein.
  
     0.526
A0A0D3D615
Uncharacterized protein.
  
     0.523
A0A0D3CE92
AP2/ERF domain-containing protein.
  
     0.522
A0A0D3CJH8
AP2/ERF domain-containing protein.
  
     0.520
A0A0D3C9H6
AP2/ERF domain-containing protein.
  
     0.518
A0A0D3AZV9
Uncharacterized protein.
  
     0.516
A0A0D3A8T7
CAAD domain-containing protein.
  
     0.515
A0A0D3AD18
AP2/ERF domain-containing protein.
  
     0.514
A0A0D3D693
AP2/ERF domain-containing protein.
  
     0.512
A0A0D3BKP3
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.511
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.