STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CIV9TPR_REGION domain-containing protein. (498 aa)    
Predicted Functional Partners:
A0A0D3A9B9
Uncharacterized protein.
      
 0.487
A0A0D3B0L9
Uncharacterized protein.
      
 0.487
A0A0D3EG73
BAH domain-containing protein.
      
 0.487
A0A0D3EG74
Uncharacterized protein.
      
 0.487
A0A0D3DTV2
G domain-containing protein.
      
 0.453
A0A0D3ACM8
PB1 domain-containing protein.
      
 0.450
A0A0D3CJ07
PB1 domain-containing protein.
      
 0.450
A0A0D3CCH5
TPR_REGION domain-containing protein.
      
 0.405
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.